Use this Category for discussions on the Cell Development Kit (CDK)–the software tools designed to support the design and analysis of synthetic cells.
How to use this category:
Bug reports
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Functions not working as expected? Tag with
bug -
What you did [include example lines that you ran].
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Include any relevant error messages that you’re seeing.
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Some context – for example something like “Running conventional PURE analysis and want to export kinetics data. This can be found in Cell X of jupyter notebook
<link to notebook> -
A screenshot of relevant variables [like: A screenshot of your dataframe
dfhere would be also beneficial to know what format you’re in. ] -
What you did to try to resolve it yourself and what you dont understand or think is the problem
New features
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Ideas for new analysis functions or tools? Tag with
feature-request -
Describe what biological problem you’re trying to solve
Coding help
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Need help writing code or using CDK functions? Tag with
question -
No coding question is too basic - we all started somewhere!
Sharing scripts
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Created a useful analysis or automation? Tag with
discussion -
Share your code to help others with similar experiments
Remember: The best tools come from community feedback. Don’t hesitate to point out even small improvements - they help everyone!